PCI partners with the Church of Central Africa Presbyterian, the largest protestant denomination in Malawi. CCAP has three autonomous Synods in Malawi: Blantyre, Livingstonia and Nkhoma.

The Synods of Zambia and Harare complete the membership of CCAP’s General Assembly which normally meets every four years. The three Malawian Synods have programmes of Evangelism and Christian Training, and train ministers at Zomba Theological College (ZTC).  Due to the critical need for Ministers, all three Synods have started parallel theological training programmes.